You could start out gradually. Like sit on the ground and clicker train her to hop in your lap, then click and treat. Then work up from there and pick her up from your lap and hold her, click and treat, then put her down. I think you want to do the click and treat while you are actually holding her and not after you put her down, so that she associates the treats with being held and not with being released. @katielovesleo3 does clicker training with her rabbit. She may have some ideas for you.
When my wiggly buns start wiggling when I pick them up and hold them, I'll press them close against me so they don't jump out of my arms and get hurt, and sometimes I'll place a hand over their head too, to help calm them down. If they wiggle when I'm setting them down, I won't let them go and will bring them back up until they hold still, then I'll try setting down again. I won't set them down and let them go until they are reasonably still as I'm setting them down. I do it that way cause I don't want them learning that if they wiggle I'll let them go.