I would try getting him in a carrier, and then wrapping him in a towel so he feels secure when you try and check him out, try polysporin in any small scrapes or shallow wounds, I’m not sure what to do about his nails… and it sounds like you are doing your best so don’t put yourself down:)
What is your bunnies diet? I have never experienced it but most likely the clear pee is from something the bun is eating. Or there is liver/ kidney issues. It’s best not to stress, just see if it gets worse or better, and I’m sure someone else here has some more directed advice.
Hello:) it sounds like you are doing a fantastic job right now, sometimes honestly they work it out themselves, but if it looks like things are getting messy defiantly separate them. Sometimes they just need a minute and then you can put them together again:)
I bred my doe on the 28 of July and am expecting her to have babies soon. I haven't bred her with this buck yet. I am curious if anyone has any guesses of what colour babies she will have. The sire is black and the dam is blue tort.